CleaveLand 3 has now been completed and is ready for use. It is substantially different than both CleaveLand 1 (Described by Addo-Quaye et al. (2009) in bioinformatics, as well as CleaveLand2. It runs much faster, no longer uses extensive random queries, and has a sound statistical footing to assess the likelihood of a hit occurring by random chance, taking into account both the quality of the small RNA / mRNA alignment and the noise in the degradome library being analyzed.
Comments / complaints / bugs / and especially praise welcomed. -- mike a
Comments / complaints / bugs / and especially praise welcomed. -- mike a